BMC Bioinformatics
"To denoise or to cluster, that is not the question: optimizing pipelines for COI metabarcoding and metaphylogeography."
Ecological Applications
"From metabarcoding to metaphylogeography: separating the wheat from the chaff."
Molecular Ecology
"Marine biomonitoring with eDNA: can metabarcoding of water samples cut it as a tool for surveying benthic communities?"
Diversity
"DNA Metabarcoding of Deep-Sea Sediment Communities Using COI: Community Assessment, Spatio-Temporal Patterns and Comparison with 18S rDNA."
Frontiers in Marine Science
"More Than Expected From Old Sponge Samples: A Natural Sampler DNA Metabarcoding Assessment of Marine Fish Diversity in Nha Trang Bay (Vietnam)."
Journal of Ecology
"Biogeographical scenarios modulate seagrass resistance to small-scale perturbations."
Journal of Biogeography
"Metabarcoding reveals high-resolution biogeographic and metaphylogeographic patterns through marine barriers."
PeerJ
"DnoisE: distance denoising by entropy. An open-source paralleliz-
able alternative for denoising sequence datasets."
STOTEN
"From biomarkers to community composition: negative effects of UV/chlorine-treated reclaimed urban wastewater on freshwater biota."
iScience
"A new sampling device for metabarcoding surveillance of port communities and detection of non-indigenous species."
Frontiers in Marine Science
"Metabarcoding the eukaryotic community of a threatened, iconic
Mediterranean habitat: Posidonia oceanica seagrass meadows."
Environmental DNA
"Investigating pelagic biodiversity and gelatinous zooplankton communities in the rapidly changing European Arctic:
an eDNA metabarcoding survey"
Scientific Reports
"Metabarcoding identifies macroalgal composition as a driver of benthic invertebrate assemblages in restored habitats